STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01069.1Putative RuBisCO operon transcriptional regulator; KEGG: bph:Bphy_6689 4.6e-21 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family. (287 aa)    
Predicted Functional Partners:
EHM01070.1
Hypothetical protein; KEGG: art:Arth_4496 0.00088 NADH dehydrogenase (quinone) K05903; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.830
EHM00677.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 5.7e-23 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.95; Belongs to the LysR transcriptional regulatory family.
  
     0.766
EHL99523.1
LysR substrate binding domain protein; KEGG: pmy:Pmen_3029 5.5e-15 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.67; Belongs to the LysR transcriptional regulatory family.
  
     0.740
EHL99883.1
LysR substrate binding domain protein; KEGG: apb:SAR116_2463 7.4e-30 transcriptional regulator, substrate-binding of LysR family protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.717
EHL97528.1
LysR substrate binding domain protein; KEGG: apb:SAR116_0336 3.3e-20 transcriptional regulator, LysR family; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.714
EHL96408.1
LysR substrate binding domain protein; KEGG: apb:SAR116_0336 5.0e-24 transcriptional regulator, LysR family; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.678
EHM01001.1
Putative oxidative stress regulatory protein OxyR; KEGG: mct:MCR_0286 1.8e-42 LysR family transcriptional regulator K04761; Psort location: Cytoplasmic, score: 9.95; Belongs to the LysR transcriptional regulatory family.
  
     0.669
EHL98980.1
LysR substrate binding domain protein; KEGG: mex:Mext_1111 4.4e-64 carbonate dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.477
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.