STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00919.1DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50. (279 aa)    
Predicted Functional Partners:
EHM00920.1
Hypothetical protein; KEGG: bmj:BMULJ_01669 0.0032 formyl-CoA transferase.
 
     0.904
EHM00918.1
KEGG: bmd:BMD_1545 0.0061 antibiotic biosynthesis monooxygenase; Psort location: Cytoplasmic, score: 7.50.
       0.808
EHL96693.1
Glyoxalase family protein; KEGG: azo:azo2654 2.6e-11 lactoylglutathione lyase K04750; Psort location: Cytoplasmic, score: 7.50.
  
     0.681
EHL96356.1
Putative PEP-CTERM system TPR-repeat lipoprotein; KEGG: rcp:RCAP_rcc02134 2.8e-18 sbcC; exonuclease SbcCD subunit C K03546; Psort location: Cytoplasmic, score: 7.50.
     
 0.506
EHL95395.1
FAD binding domain protein; KEGG: fre:Franean1_3055 1.4e-83 monooxygenase FAD-binding; K05712 3-(3-hydroxy-phenyl)propionate hydroxylase; Psort location: Cytoplasmic, score: 7.50.
  
     0.451
EHM02264.1
Toxin-antitoxin system, toxin component, GNAT domain protein; KEGG: cvi:CV_3493 3.5e-39 acetyltransferase protein K00680; Psort location: Cytoplasmic, score: 7.50.
    
  0.432
EHM02830.1
Sigma-70 region 2; KEGG: mmc:Mmcs_0139 9.6e-15 RNA polymerase factor sigma-70 K03088; Psort location: Cytoplasmic, score: 9.95.
  
     0.400
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.