STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00538.1Phage portal protein, HK97 family; Psort location: Cytoplasmic, score: 7.50. (442 aa)    
Predicted Functional Partners:
EHM00536.1
Phage capsid family protein.
 
 
 
 0.952
EHM00537.1
Phage prohead protease, HK97 family; KEGG: mtu:Rv2651c 1.4e-10 phiRv2 prophage protease K06904; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.927
EHM00539.1
Putative phage terminase, large subunit; Psort location: CytoplasmicMembrane, score: 8.16.
 
   
 0.917
EHM01416.1
Phage capsid family protein.
 
 
 
 0.901
EHM01146.1
Putative phage terminase, large subunit; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.795
EHM01413.1
Putative phage terminase, large subunit; Psort location: CytoplasmicMembrane, score: 8.16.
 
   
 0.788
EHM02244.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.743
EHM00521.1
Hypothetical protein; KEGG: apo:Arcpr_1060 0.0098 thiamine pyrophosphate protein domain protein TPP-binding protein; K00170 pyruvate ferredoxin oxidoreductase, beta subunit.
  
   0.743
EHM00540.1
Terminase small subunit; KEGG: aca:ACP_2354 0.0089 putative dihydrolipoamide acetyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase); Psort location: Cytoplasmic, score: 7.50.
 
   
 0.584
EHM01430.1
Hypothetical protein.
   
   0.551
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.