STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00542.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (96 aa)    
Predicted Functional Partners:
EHM00541.1
HNH endonuclease domain protein; KEGG: scl:sce8204 0.00077 putative helicase; Psort location: Cytoplasmic, score: 7.50.
       0.773
EHM00543.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.773
EHM00476.1
Hypothetical protein; KEGG: bcv:Bcav_3122 0.0047 adenylate kinase; K00939 adenylate kinase; Psort location: Cytoplasmic, score: 7.50.
       0.718
EHM00454.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.668
EHM00540.1
Terminase small subunit; KEGG: aca:ACP_2354 0.0089 putative dihydrolipoamide acetyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase); Psort location: Cytoplasmic, score: 7.50.
       0.453
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.