STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00134.1Transcriptional regulator, GntR family; KEGG: apb:SAR116_1743 2.2e-09 regulatory protein GntR, HTH:GntR, C-terminal; Psort location: CytoplasmicMembrane, score: 8.16. (310 aa)    
Predicted Functional Partners:
EHM01908.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: bra:BRADO2616 1.2e-125 hypothetical protein; K10852 isopenicillin-N N-acyltransferase; Psort location: CytoplasmicMembrane, score: 8.16.
 
     0.580
EHM00133.1
Tat pathway signal sequence domain protein; KEGG: pol:Bpro_4551 6.8e-17 methylitaconate delta2-delta3-isomerase K09788; Psort location: CytoplasmicMembrane, score: 9.87.
       0.554
EHM00320.1
Hypothetical protein; KEGG: bmq:BMQ_1848 0.00045 phaZ3; putative poly(3-hydroxybutyrate) depolymerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.517
EHM00135.1
Putative aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
    0.512
EHM01906.1
Hypothetical protein; KEGG: bmq:BMQ_1848 9.6e-06 phaZ3; putative poly(3-hydroxybutyrate) depolymerase; Psort location: Cytoplasmic, score: 7.50.
  
     0.507
EHM00050.1
Hypothetical protein; KEGG: bph:Bphy_6877 1.6e-107 6-phosphogluconolactonase.
 
     0.495
EHM01863.1
KEGG: apb:SAR116_0760 4.3e-08 polyamine ABC transporter, periplasmic polyamine-binding protein K02055.
  
     0.490
EHL99934.1
Tat pathway signal sequence domain protein; KEGG: apb:SAR116_1794 2.2e-37 spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02055; Psort location: Cytoplasmic, score: 7.50.
  
     0.448
EHM01909.1
KEGG: bra:BRADO2617 6.9e-153 ABC transporter substrate-binding protein K02035; Psort location: Cellwall, score: 9.07.
  
     0.440
EHL98313.1
Tat pathway signal sequence domain protein; KEGG: apb:SAR116_0760 1.6e-36 polyamine ABC transporter, periplasmic polyamine-binding protein K02055; Psort location: Cytoplasmic, score: 7.50.
  
     0.439
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.