STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99894.1Peptidase, M20/M25/M40 family; KEGG: ddd:Dda3937_01351 8.7e-130 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like deacylase; Psort location: Cytoplasmic, score: 7.50. (468 aa)    
Predicted Functional Partners:
EHM00871.1
FAD binding domain protein; KEGG: bbt:BBta_5731 5.6e-293 D-lactate dehydrogenase / anaerobic glycerol-3-phosphate dehydrogenase subunit C K00102; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
  0.576
EHL98740.1
KEGG: bur:Bcep18194_C7704 7.9e-287 FAD linked oxidase K06911; Psort location: CytoplasmicMembrane, score: 8.78.
   
  0.501
EHM00926.1
Hypothetical protein.
  
  
  0.480
EHM02264.1
Toxin-antitoxin system, toxin component, GNAT domain protein; KEGG: cvi:CV_3493 3.5e-39 acetyltransferase protein K00680; Psort location: Cytoplasmic, score: 7.50.
  
 
  0.470
EHL99895.1
KEGG: apb:SAR116_1162 4.3e-34 auxin efflux carrier K07088; Psort location: CytoplasmicMembrane, score: 10.00.
       0.447
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
 
 0.443
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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