STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99936.1KEGG: apb:SAR116_1792 8.8e-50 ABC transporter, permease protein, putative K02054; Psort location: CytoplasmicMembrane, score: 10.00. (315 aa)    
Predicted Functional Partners:
EHL99935.1
ABC transporter, permease protein; KEGG: rsc:RCFBP_11743 1.2e-54 putative spermidine/putrescine transport system permease (PotC) K02053; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.991
EHM01985.1
ABC transporter, permease protein; KEGG: rsc:RCFBP_11743 3.4e-41 putative spermidine/putrescine transport system permease (PotC) K02053; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.987
EHL95757.1
ABC transporter, permease protein; KEGG: rsc:RCFBP_11743 3.1e-63 putative spermidine/putrescine transport system permease (PotC) K02053; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.987
EHL98311.1
ABC transporter, permease protein; KEGG: rsc:RCFBP_11743 6.6e-45 putative spermidine/putrescine transport system permease (PotC) K02053; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.962
EHL95385.1
ABC transporter, permease protein; KEGG: met:M446_6381 2.7e-32 ornithine carbamoyltransferase K11074; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.946
potA-2
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  0.940
EHM02251.1
ABC transporter, permease protein; KEGG: mmw:Mmwyl1_3520 8.6e-68 ornithine carbamoyltransferase K11074; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.907
EHL99934.1
Tat pathway signal sequence domain protein; KEGG: apb:SAR116_1794 2.2e-37 spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02055; Psort location: Cytoplasmic, score: 7.50.
 
 
  0.895
EHM02248.1
Putative putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.888
EHM02249.1
KEGG: mea:Mex_1p4585 7.7e-83 potG; putrescine transporter, ATP-binding component of ABC transporter K11076; Psort location: CytoplasmicMembrane, score: 9.96.
 
  0.877
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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