STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99808.1Hypothetical protein; KEGG: krh:KRH_04540 1.0e-08 S1C family peptidase; Psort location: CytoplasmicMembrane, score: 9.87. (274 aa)    
Predicted Functional Partners:
EHL99510.1
KEGG: pfl:PFL_0499 1.8e-113 glycerol kinase, putative; K00864 glycerol kinase; Psort location: Cytoplasmic, score: 9.95; Belongs to the FGGY kinase family.
    
 0.811
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.811
EHL97798.1
Catalase; KEGG: gbe:GbCGDNIH1_1969 2.3e-225 catalase K03781; Psort location: Cytoplasmic, score: 9.97.
   
 0.752
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 
  0.721
EHL95547.1
WD-repeat family protein; KEGG: afm:AFUA_7G07100 2.5e-14 Pfs, NACHT and WD domain protein K00777.
  
  
  0.694
lon
Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
    
 0.610
EHL96356.1
Putative PEP-CTERM system TPR-repeat lipoprotein; KEGG: rcp:RCAP_rcc02134 2.8e-18 sbcC; exonuclease SbcCD subunit C K03546; Psort location: Cytoplasmic, score: 7.50.
   
 0.590
EHM03348.1
Response regulator receiver domain protein; KEGG: hne:HNE_1508 3.5e-229 sensor histidine kinase/response regulator K00936; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.559
EHL99807.1
Hypothetical protein; KEGG: mrb:Mrub_0744 3.2e-05 RNA binding metal dependent phosphohydrolase K06950; Psort location: Cytoplasmic, score: 7.50.
       0.557
EHL98199.1
Tetratricopeptide repeat protein; KEGG: bme:BMEI0293 5.1e-15 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase K01066.
  
 
  0.490
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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