STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL99613.1Oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: reh:H16_B0716 1.1e-99 dppF3; ABC transporter ATPase K02032; Psort location: CytoplasmicMembrane, score: 9.96. (354 aa)    
Predicted Functional Partners:
EHL99612.1
KEGG: cch:Cag_1883 1.4e-92 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 
0.943
EHL97388.1
ABC transporter, ATP-binding protein; KEGG: reh:H16_B1125 5.7e-78 ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
0.934
EHM02423.1
Putative dipeptide ABC transporter, permease protein DppC; KEGG: apb:SAR116_0601 4.2e-66 binding-protein-dependent transport systems inner membrane component K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 0.932
EHL99609.1
ABC transporter, permease protein; KEGG: bov:BOV_A0752 2.8e-46 nikC; nickel transporter permease NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 0.918
EHM03152.1
KEGG: bra:BRADO2619 1.1e-51 putative ABC transporter permease protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 0.914
EHM02541.1
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: bra:BRADO1095 3.9e-47 oppC; oligopeptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 0.913
EHL96088.1
Putative dipeptide ABC transporter, permease protein DppC; KEGG: bmi:BMEA_B0781 8.7e-59 nikC; nickel transporter permease NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 0.907
EHL99424.1
KEGG: bmi:BMEA_B0781 2.5e-84 nikC; nickel transporter permease NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 0.903
EHL98648.1
ABC transporter, ATP-binding protein; KEGG: srm:SRM_03053 3.4e-41 msbA; lipid A export ATP-binding/permease protein MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 9.96.
 
     
0.899
EHL95093.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A4271 4.1e-171 ABC efflux pump, fused ATPase and inner membrane subunits K06021; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.897
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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