Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHL97542.1 | EHL97676.1 | HMPREF9946_04085 | HMPREF9946_04023 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Protein, SNF2 family; KEGG: psl:Psta_4040 1.2e-13 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50. | 0.992 |
| EHL97542.1 | EHL98820.1 | HMPREF9946_04085 | HMPREF9946_03464 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: gbe:GbCGDNIH1_0904 4.7e-186 ATP-dependent DNA ligase K01971; Psort location: Cytoplasmic, score: 7.50. | 0.994 |
| EHL97542.1 | EHL98821.1 | HMPREF9946_04085 | HMPREF9946_03465 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein; KEGG: azo:azo0443 3.2e-68 beta-lactamase K07577; Psort location: Cytoplasmic, score: 7.50. | 0.454 |
| EHL97542.1 | EHM02946.1 | HMPREF9946_04085 | HMPREF9946_00636 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: gbe:GbCGDNIH1_1076 1.5e-77 DNA polymerase III subunit delta' K02341; Psort location: Cytoplasmic, score: 9.97. | 0.998 |
| EHL97542.1 | EHM03127.1 | HMPREF9946_04085 | HMPREF9946_00430 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ser/Thr phosphatase family protein; KEGG: gox:GOX1019 2.0e-68 putative exonuclease K01146; Psort location: Cytoplasmic, score: 7.50. | 0.791 |
| EHL97542.1 | EHM03322.1 | HMPREF9946_04085 | HMPREF9946_00284 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein; KEGG: gbe:GbCGDNIH1_2175 4.9e-271 ATP-dependent helicase DinG; K03722 ATP-dependent DNA helicase DinG; Psort location: CytoplasmicMembrane, score: 8.16. | 0.881 |
| EHL97542.1 | ligA | HMPREF9946_04085 | HMPREF9946_01333 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.708 |
| EHL97542.1 | polA | HMPREF9946_04085 | HMPREF9946_05090 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
| EHL97676.1 | EHL97542.1 | HMPREF9946_04023 | HMPREF9946_04085 | Protein, SNF2 family; KEGG: psl:Psta_4040 1.2e-13 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.992 |
| EHL97676.1 | EHL98820.1 | HMPREF9946_04023 | HMPREF9946_03464 | Protein, SNF2 family; KEGG: psl:Psta_4040 1.2e-13 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50. | KEGG: gbe:GbCGDNIH1_0904 4.7e-186 ATP-dependent DNA ligase K01971; Psort location: Cytoplasmic, score: 7.50. | 0.835 |
| EHL97676.1 | EHL98821.1 | HMPREF9946_04023 | HMPREF9946_03465 | Protein, SNF2 family; KEGG: psl:Psta_4040 1.2e-13 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: azo:azo0443 3.2e-68 beta-lactamase K07577; Psort location: Cytoplasmic, score: 7.50. | 0.568 |
| EHL97676.1 | EHM02946.1 | HMPREF9946_04023 | HMPREF9946_00636 | Protein, SNF2 family; KEGG: psl:Psta_4040 1.2e-13 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50. | KEGG: gbe:GbCGDNIH1_1076 1.5e-77 DNA polymerase III subunit delta' K02341; Psort location: Cytoplasmic, score: 9.97. | 0.502 |
| EHL97676.1 | EHM03127.1 | HMPREF9946_04023 | HMPREF9946_00430 | Protein, SNF2 family; KEGG: psl:Psta_4040 1.2e-13 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50. | Ser/Thr phosphatase family protein; KEGG: gox:GOX1019 2.0e-68 putative exonuclease K01146; Psort location: Cytoplasmic, score: 7.50. | 0.777 |
| EHL97676.1 | EHM03322.1 | HMPREF9946_04023 | HMPREF9946_00284 | Protein, SNF2 family; KEGG: psl:Psta_4040 1.2e-13 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: gbe:GbCGDNIH1_2175 4.9e-271 ATP-dependent helicase DinG; K03722 ATP-dependent DNA helicase DinG; Psort location: CytoplasmicMembrane, score: 8.16. | 0.891 |
| EHL97676.1 | polA | HMPREF9946_04023 | HMPREF9946_05090 | Protein, SNF2 family; KEGG: psl:Psta_4040 1.2e-13 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.995 |
| EHL98820.1 | EHL97542.1 | HMPREF9946_03464 | HMPREF9946_04085 | KEGG: gbe:GbCGDNIH1_0904 4.7e-186 ATP-dependent DNA ligase K01971; Psort location: Cytoplasmic, score: 7.50. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.994 |
| EHL98820.1 | EHL97676.1 | HMPREF9946_03464 | HMPREF9946_04023 | KEGG: gbe:GbCGDNIH1_0904 4.7e-186 ATP-dependent DNA ligase K01971; Psort location: Cytoplasmic, score: 7.50. | Protein, SNF2 family; KEGG: psl:Psta_4040 1.2e-13 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 7.50. | 0.835 |
| EHL98820.1 | EHL98821.1 | HMPREF9946_03464 | HMPREF9946_03465 | KEGG: gbe:GbCGDNIH1_0904 4.7e-186 ATP-dependent DNA ligase K01971; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: azo:azo0443 3.2e-68 beta-lactamase K07577; Psort location: Cytoplasmic, score: 7.50. | 0.999 |
| EHL98820.1 | EHM00130.1 | HMPREF9946_03464 | HMPREF9946_02737 | KEGG: gbe:GbCGDNIH1_0904 4.7e-186 ATP-dependent DNA ligase K01971; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: lpl:lp_3251 0.0044 3',5'-cyclic-nucleotide phosphodiesterase K01120; Psort location: CytoplasmicMembrane, score: 9.55. | 0.853 |
| EHL98820.1 | EHM00132.1 | HMPREF9946_03464 | HMPREF9946_02739 | KEGG: gbe:GbCGDNIH1_0904 4.7e-186 ATP-dependent DNA ligase K01971; Psort location: Cytoplasmic, score: 7.50. | KEGG: acr:Acry_1613 7.0e-279 DEAD/DEAH box helicase domain-containing protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase; Psort location: CytoplasmicMembrane, score: 8.16. | 0.836 |
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