STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98648.1ABC transporter, ATP-binding protein; KEGG: srm:SRM_03053 3.4e-41 msbA; lipid A export ATP-binding/permease protein MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 9.96. (254 aa)    
Predicted Functional Partners:
EHL96054.1
Thiol reductant ABC exporter, CydD subunit; KEGG: cch:Cag_0716 2.1e-73 ATPase K06148; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.946
EHM01365.1
Thiol reductant ABC exporter, CydD subunit; KEGG: har:HEAR1372 1.2e-134 cydD; ABC transporter ATP-binding protein K06148; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.925
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    
0.912
potA-3
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
    
0.909
phnC-2
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
    
0.909
fbpC
ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
    
0.907
EHM01868.1
KEGG: reh:H16_B1868 1.2e-86 ssuB2; ABC-type sulfonate transporter, ATPase component K02049; Psort location: CytoplasmicMembrane, score: 9.96.
 
    
0.903
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
EHL99613.1
Oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: reh:H16_B0716 1.1e-99 dppF3; ABC transporter ATPase K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
     
0.899
EHL99998.1
KEGG: azc:AZC_2734 6.9e-98 ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
    
0.896
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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