STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97931.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87. (173 aa)    
Predicted Functional Partners:
EHL97930.1
Bacterial transferase hexapeptide repeat protein; KEGG: ath:AT1G19580 8.1e-40 GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1); carbonate dehydratase; Psort location: Cytoplasmic, score: 7.50.
       0.728
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
       0.649
EHL97932.1
Hypothetical protein; KEGG: pau:PA14_25740 0.0084 tmk; thymidylate kinase; K00943 dTMP kinase.
      
0.592
EHL97933.1
Methyl-accepting chemotaxis protein signaling domain protein; KEGG: ctu:Ctu_04770 7.1e-26 aer; aerotaxis receptor K03776; Psort location: CytoplasmicMembrane, score: 9.81.
       0.429
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.422
rpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 1.3e-46 ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.67; Belongs to the universal ribosomal protein uS9 family.
       0.422
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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