Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHL97635.1 | EHL97636.1 | HMPREF9946_04074 | HMPREF9946_04075 | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | Nucleotide-binding protein-like family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.773 |
| EHL97635.1 | EHL98868.1 | HMPREF9946_04074 | HMPREF9946_03435 | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | Transcriptional regulator, effector binding domain protein; KEGG: mno:Mnod_0501 4.5e-10 transcriptional regulator, AraC family; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97. | 0.532 |
| EHL97635.1 | lexA | HMPREF9946_04074 | HMPREF9946_04208 | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.544 |
| EHL97635.1 | rpoD | HMPREF9946_04074 | HMPREF9946_01305 | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.930 |
| EHL97635.1 | rpoD-2 | HMPREF9946_04074 | HMPREF9946_01607 | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.613 |
| EHL97635.1 | rpoH | HMPREF9946_04074 | HMPREF9946_04172 | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | Alternative sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.613 |
| EHL97636.1 | EHL97635.1 | HMPREF9946_04075 | HMPREF9946_04074 | Nucleotide-binding protein-like family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | 0.773 |
| EHL98868.1 | EHL97635.1 | HMPREF9946_03435 | HMPREF9946_04074 | Transcriptional regulator, effector binding domain protein; KEGG: mno:Mnod_0501 4.5e-10 transcriptional regulator, AraC family; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97. | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | 0.532 |
| EHL98868.1 | rpoD | HMPREF9946_03435 | HMPREF9946_01305 | Transcriptional regulator, effector binding domain protein; KEGG: mno:Mnod_0501 4.5e-10 transcriptional regulator, AraC family; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.440 |
| lexA | EHL97635.1 | HMPREF9946_04208 | HMPREF9946_04074 | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | 0.544 |
| lexA | rpoD | HMPREF9946_04208 | HMPREF9946_01305 | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.469 |
| rpoD | EHL97635.1 | HMPREF9946_01305 | HMPREF9946_04074 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | 0.930 |
| rpoD | EHL98868.1 | HMPREF9946_01305 | HMPREF9946_03435 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | Transcriptional regulator, effector binding domain protein; KEGG: mno:Mnod_0501 4.5e-10 transcriptional regulator, AraC family; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97. | 0.440 |
| rpoD | lexA | HMPREF9946_01305 | HMPREF9946_04208 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.469 |
| rpoD | rpoH | HMPREF9946_01305 | HMPREF9946_04172 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | Alternative sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.464 |
| rpoD-2 | EHL97635.1 | HMPREF9946_01607 | HMPREF9946_04074 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | 0.613 |
| rpoH | EHL97635.1 | HMPREF9946_04172 | HMPREF9946_04074 | Alternative sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | KEGG: mdi:METDI4110 4.4e-64 inh; isonitrile hydratase, ThiJ/PfpI family protein; Psort location: Cytoplasmic, score: 7.50. | 0.613 |
| rpoH | rpoD | HMPREF9946_04172 | HMPREF9946_01305 | Alternative sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.464 |