STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97445.1Redox-sensitive transcriptional activator SoxR; KEGG: ctu:Ctu_38200 2.5e-06 zntR; zinc-responsive transcriptional regulator K13638; Psort location: Cytoplasmic, score: 7.50. (160 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.887
EHL96921.1
KEGG: gbe:GbCGDNIH1_0704 0. glutamate synthase [NADPH] large chain K00265; Psort location: Cytoplasmic, score: 7.50.
    
 0.864
EHM03348.1
Response regulator receiver domain protein; KEGG: hne:HNE_1508 3.5e-229 sensor histidine kinase/response regulator K00936; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.820
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.785
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.780
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.780
EHL98298.1
PAS domain S-box protein; KEGG: ccs:CCNA_03272 2.6e-34 two-component sensor histidine kinase; Psort location: Cytoplasmic, score: 7.50.
   
 0.759
EHM03405.1
DnaJ domain protein; KEGG: apb:SAR116_1908 1.3e-14 heat shock protein DnaJ domain protein.
  
 
 0.742
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
 
 0.742
EHL95755.1
DnaJ region; KEGG: apb:SAR116_1614 3.3e-34 molecular chaperone, DnaJ family K03686; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.742
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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