STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96747.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (108 aa)    
Predicted Functional Partners:
EHL96748.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.506
argH
Argininosuccinate lyase; KEGG: gbe:GbCGDNIH1_0127 1.7e-174 argininosuccinate lyase K01755; Psort location: Cytoplasmic, score: 7.50.
       0.506
EHL96745.1
TIGR02302 family protein; KEGG: uma:UM02328.1 6.0e-13 hypothetical protein; K01409 O-sialoglycoprotein endopeptidase; Psort location: CytoplasmicMembrane, score: 8.16.
       0.497
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.497
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.