STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96330.1Hypothetical protein; KEGG: rlt:Rleg2_4701 0.00031 transcriptional regulator, LysR family; Psort location: Cytoplasmic, score: 7.50. (143 aa)    
Predicted Functional Partners:
EHL96331.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
      0.941
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
     0.578
phnW-2
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
     0.535
EHL96329.1
KEGG: apb:SAR116_2133 4.3e-18 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 7.50.
       0.473
EHL98705.1
KEGG: reh:H16_B0836 7.2e-87 phnA; phosphonoacetate hydrolase; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.401
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.