STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95757.1ABC transporter, permease protein; KEGG: rsc:RCFBP_11743 3.1e-63 putative spermidine/putrescine transport system permease (PotC) K02053; Psort location: CytoplasmicMembrane, score: 10.00. (263 aa)    
Predicted Functional Partners:
EHL95758.1
KEGG: apb:SAR116_0759 2.4e-70 polyamine ABC transporter, permease protein K02054; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.999
EHL98312.1
KEGG: apb:SAR116_1792 1.3e-50 ABC transporter, permease protein, putative K02054; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.993
EHM02250.1
Putative putrescine transport system permease protein PotH; KEGG: mdi:METDI5194 7.1e-64 potH; putrescine transporter, membrane component of ABC transporter K11075; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.987
EHL99936.1
KEGG: apb:SAR116_1792 8.8e-50 ABC transporter, permease protein, putative K02054; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.987
EHM02248.1
Putative putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  0.986
EHM01986.1
ABC transporter, permease protein; KEGG: mdi:METDI5194 3.4e-32 potH; putrescine transporter, membrane component of ABC transporter K11075; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.986
EHL95759.1
KEGG: apb:SAR116_0760 2.4e-72 polyamine ABC transporter, periplasmic polyamine-binding protein K02055.
 
 
  0.972
EHM02295.1
KEGG: apb:SAR116_1792 2.9e-28 ABC transporter, permease protein, putative K02054; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.933
EHL99934.1
Tat pathway signal sequence domain protein; KEGG: apb:SAR116_1794 2.2e-37 spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02055; Psort location: Cytoplasmic, score: 7.50.
 
 
  0.909
EHM03271.1
Tat pathway signal sequence domain protein; KEGG: apb:SAR116_1794 1.2e-43 spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02055; Psort location: Cytoplasmic, score: 7.50.
 
 
  0.905
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.