STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95472.1Hypothetical protein; KEGG: ctu:Ctu_33580 1.4e-10 ygdD; hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (124 aa)    
Predicted Functional Partners:
EHL95473.1
Hypothetical protein; KEGG: pva:Pvag_2478 5.3e-10 ygdE; putative RNA 2'-O-ribose methyltransferase MtfA; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.921
EHL95471.1
KEGG: ara:Arad_8026 4.1e-13 phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.64.
       0.781
EHL96919.1
KEGG: cyb:CYB_1515 6.8e-06 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.468
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.