STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95283.1Peptidase Do; KEGG: gbe:GbCGDNIH1_0147 8.3e-102 endopeptidase DegP K01362. (364 aa)    
Predicted Functional Partners:
EHL99510.1
KEGG: pfl:PFL_0499 1.8e-113 glycerol kinase, putative; K00864 glycerol kinase; Psort location: Cytoplasmic, score: 9.95; Belongs to the FGGY kinase family.
    
 0.811
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.811
EHL97798.1
Catalase; KEGG: gbe:GbCGDNIH1_1969 2.3e-225 catalase K03781; Psort location: Cytoplasmic, score: 9.97.
   
 0.752
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 
  0.723
EHM01390.1
Trypsin; KEGG: gbe:GbCGDNIH1_0147 6.2e-81 endopeptidase DegP K01362.
  
  
 
0.719
EHL96179.1
Putative serine protease MucD; KEGG: gbe:GbCGDNIH1_1490 7.5e-140 endopeptidase DegP K01362; Psort location: CytoplasmicMembrane, score: 9.87; Belongs to the peptidase S1C family.
  
  
 
0.717
rplY
Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
 
   0.635
lon
Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
    
 0.615
EHL95284.1
KEGG: gdj:Gdia_2159 7.0e-231 ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB; Psort location: Cytoplasmic, score: 7.50.
       0.594
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
 
 
   0.591
Your Current Organism:
Acetobacteraceae bacterium AT5844
NCBI taxonomy Id: 1054213
Other names: A. bacterium AT-5844, Acetobacteraceae bacterium AT-5844
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.