STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI47017.1Signal peptidase I. (269 aa)    
Predicted Functional Partners:
AGI47244.1
Hypothetical protein.
     
  0.900
atpF
Archaeal/vacuolar-type H+-ATPase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
  
  0.779
atpC
ATP synthase A1, C subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
  
 0.772
AGI47185.1
Archaeal conserved hypothetical protein.
  
    0.700
AGI47896.1
Putative secreted protein containing a PDZ domain.
 
  
 0.695
AGI47432.1
DNA-directed RNA polymerase, alpha subunit/40 kD subunit.
  
    0.683
AGI47914.1
Putative archaeal coiled-coil protein.
  
     0.675
AGI48292.1
Putative membrane protein.
  
     0.675
AGI48504.1
Archaeal conserved hypothetical protein.
  
     0.675
AGI47020.1
Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
  
  0.672
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.