STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI47079.1Phosphoheptose isomerase. (222 aa)    
Predicted Functional Partners:
AGI47078.1
Histidinol-phosphate phosphatase family domain/HAD-superfamily hydrolase, subfamily IIIA.
  
 0.997
AGI47077.1
Putative kinase (galactokinase and mevalonate kinase -like protein).
  
 0.949
AGI47076.1
Mannose-1-phosphate guanylyltransferase; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
 
  
 0.869
AGI47080.1
Acetolactate synthase, small (regulatory) subunit.
 
     0.645
ilvE
Branched-chain amino acid aminotransferase, group I; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
    0.573
AGI47075.1
Hypothetical protein.
       0.553
AGI47090.1
Glycosyltransferase.
  
  
 0.431
AGI48362.1
Putative sugar phosphate isomerase involved in capsule formation.
     
 0.431
AGI48465.1
Hydrogenase expression/formation protein HypE.
     
 0.406
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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