STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI47087.14-diphosphocytidyl-2-methyl-D-erithritol synthase. (240 aa)    
Predicted Functional Partners:
AGI48530.1
LPS biosynthesis protein.
 
   
 0.537
AGI47095.1
LPS biosynthesis protein.
 
   
 0.534
AGI47086.1
Nucleoside-diphosphate-sugar epimerase.
   
 0.495
AGI47088.1
Hypothetical protein.
       0.486
AGI47089.1
Hypothetical protein.
       0.486
nadK
Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
     
 0.460
AGI47098.1
Phosphoenolpyruvate phosphomutase.
     
 0.435
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.