STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI47097.1Phosphonopyruvate decarboxylase. (372 aa)    
Predicted Functional Partners:
AGI47098.1
Phosphoenolpyruvate phosphomutase.
  
 0.998
AGI47096.1
2-aminoethylphosphonate aminotransferase.
 
  
 0.970
AGI47598.1
L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
     
 0.806
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
      
 0.796
AGI47481.1
Methyl-coenzyme M reductase I operon protein C.
      
 0.760
AGI47472.1
Methyl coenzyme M reductase, subunit D.
      
 0.632
AGI47099.1
Hypothetical protein.
       0.623
AGI47115.1
Isopropylmalate/homocitrate/citramalate synthase.
     
 0.555
AGI47557.1
Homocitrate synthase NifV; Belongs to the alpha-IPM synthase/homocitrate synthase family.
     
 0.555
AGI47614.1
Isopropylmalate/homocitrate/citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
     
 0.555
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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