STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI47279.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
AGI47280.1
Putative DNA-binding protein with PD1-like DNA-binding motif.
       0.714
AGI47275.1
Conserved hypothetical protein TIGR00299; Belongs to the LarC family.
       0.525
AGI47276.1
NCAIR mutase (PurE)-related protein.
       0.525
AGI47277.1
Conserved hypothetical protein TIGR00268.
       0.525
AGI47278.1
Putative transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
       0.525
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.