STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI47516.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
AGI48190.1
Listeria/Bacterioides repeat protein.
  
     0.642
AGI47308.1
Transcriptional regulator.
  
     0.639
AGI47789.1
Hypothetical protein.
  
     0.627
AGI47790.1
Hypothetical protein.
  
     0.621
AGI48089.1
Integral membrane protein DUF6.
  
     0.612
AGI47998.1
Amino acid transporter.
  
     0.585
AGI48042.1
Hypothetical protein.
  
     0.539
AGI47142.1
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
     0.535
AGI47758.1
Dolichol kinase.
  
     0.497
AGI47515.1
isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.463
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.