STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI47522.1Putative transcriptional regulator with C-terminal CBS domains. (187 aa)    
Predicted Functional Partners:
AGI47523.1
Archaeal S-adenosylmethionine synthetase.
       0.608
AGI48522.1
Hypothetical protein.
  
     0.582
AGI47249.1
Segregation and condensation protein B.
 
     0.489
AGI48426.1
Hypothetical protein.
  
     0.484
AGI48335.1
alpha-NAC-related protein.
  
     0.478
AGI47167.1
Transcriptional regulator of a riboflavin/FAD biosynthetic operon.
  
     0.451
AGI47525.1
Hypothetical protein.
       0.442
AGI47524.1
Hypothetical protein.
       0.439
AGI47467.1
Single-stranded DNA-specific exonuclease.
  
     0.407
AGI48270.1
Zn-dependent protease.
 
     0.400
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.