STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI47840.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
AGI47837.1
Hypothetical protein.
       0.773
AGI47838.1
Listeria-Bacteroides repeat domain (List_Bact_rpt).
       0.773
AGI47839.1
Hypothetical protein.
       0.773
AGI47841.1
Hypothetical protein.
       0.723
AGI47842.1
Hypothetical protein.
       0.723
AGI47843.1
Hypothetical protein.
       0.723
AGI47844.1
Hypothetical protein.
       0.676
AGI47845.1
Hypothetical protein.
       0.676
AGI47846.1
Hypothetical protein.
       0.676
AGI47847.1
Hypothetical protein.
       0.676
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.