STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI47899.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
AGI47896.1
Putative secreted protein containing a PDZ domain.
 
     0.643
mptE
Putative Rossmann fold enzyme; Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl- 7,8-dihydropterin diphosphate (6-HMDP).
       0.601
AGI47898.1
Putative membrane protein.
       0.558
AGI48483.1
Putative RNA-binding protein of the translin family.
 
     0.517
AGI48531.1
3-hexulose-6-phosphate synthase.
     
 0.497
AGI47584.1
Glucose-6-phosphate isomerase.
 
     0.486
AGI47172.1
Conserved hypothetical ATP binding protein.
 
   0.451
AGI47962.1
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase.
   
   0.419
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.