STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI48069.1CBS-domain-containing membrane protein. (391 aa)    
Predicted Functional Partners:
msrA
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.709
AGI47172.1
Conserved hypothetical ATP binding protein.
 
 0.670
AGI48070.1
valyl-tRNA synthetase.
 
  
 0.643
AGI47215.1
Putative thymidine phosphorylase/AMP phosphorylase.
   
  
 0.642
AGI48067.1
Putative transcriptional regulator, contains C-terminal CBS domains.
 
    
0.577
AGI48068.1
glycyl-tRNA synthetase, dimeric type.
     
 0.560
AGI48064.1
Cytosine deaminase-related metal-dependent hydrolase.
 
     0.509
AGI47152.1
Putative transcriptional regulator, contains C-terminal CBS domains.
 
     0.505
AGI47203.1
Putative exonuclease of the beta-lactamase fold involved in RNA processing.
  
 
 0.502
AGI48065.1
Universal stress protein UspA-related nucleotide-binding protein.
 
    0.502
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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