STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI48165.1ABC-type Fe3+-siderophore transport system, permease component. (372 aa)    
Predicted Functional Partners:
AGI48166.1
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 0.934
AGI48170.1
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 0.855
AGI48167.1
Isochorismatase family protein Amidases nicotinamidase -like protein.
  
    0.777
AGI47460.1
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 0.770
AGI48168.1
Hypothetical protein.
 
 
 0.755
AGI48180.1
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 0.741
AGI47176.1
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 0.704
AGI47891.1
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 0.693
AGI47458.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.659
AGI47825.1
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 0.629
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.