STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI48199.1Uroporphyrinogen-III synthase. (263 aa)    
Predicted Functional Partners:
AGI48197.1
Porphobilinogen deaminase.
  
 0.999
AGI48218.1
Precorrin-6x reductase.
  
  
 0.994
AGI48198.1
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.988
AGI48195.1
Porphobilinogen synthase; Belongs to the ALAD family.
 
 
 0.969
AGI47501.1
Uroporphyrinogen-III decarboxylase.
  
 
 0.917
AGI48395.1
Uroporphyrinogen-III decarboxylase.
  
 
 0.917
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.916
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
  
  
 0.875
AGI48234.1
Siroheme synthase, N-terminal domain protein.
 
  
 0.611
AGI48221.1
Hypothetical protein.
 
  
 0.588
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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