STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI48209.1ABC-type cobalt transport system, periplasmic component. (108 aa)    
Predicted Functional Partners:
AGI48218.1
Precorrin-6x reductase.
  
  
 0.998
AGI48210.1
Cobalamin biosynthesis protein CbiM.
 
 
 0.993
AGI48208.1
ABC-type cobalt transport system, permease component CbiQ-related transporter.
 
 
 0.990
AGI48207.1
Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.961
AGI48206.1
Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.957
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.634
AGI48219.1
Cobalamin biosynthesis protein CbiG.
  
  
 0.557
AGI48179.1
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.501
AGI48176.1
precorrin-8X methylmutase.
  
  
 0.443
AGI48178.1
Precorrin-4 C11-methyltransferase/cobalt-factor II C20-methyltransferase.
  
  
 0.438
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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