STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI48234.1Siroheme synthase, N-terminal domain protein. (206 aa)    
Predicted Functional Partners:
AGI48218.1
Precorrin-6x reductase.
     
 0.999
AGI48198.1
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.981
AGI48238.1
Hypothetical protein.
  
 
 0.967
AGI48179.1
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
    
 0.941
AGI48221.1
Hypothetical protein.
  
  
 0.683
AGI48199.1
Uroporphyrinogen-III synthase.
 
  
 0.611
AGI48233.1
Putative HD superfamily hydrolase.
  
    0.561
cobS
Cobalamin 5'-phosphate synthase/cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
   
 0.533
AGI47709.1
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase-related enzyme.
  
  
 0.522
AGI48269.1
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase-related enzyme.
  
  
 0.522
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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