STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI48238.1Hypothetical protein. (260 aa)    
Predicted Functional Partners:
AGI48218.1
Precorrin-6x reductase.
 
   
 0.980
AGI48234.1
Siroheme synthase, N-terminal domain protein.
  
 
 0.967
AGI48179.1
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.940
AGI48236.1
Putative methanogenesis marker 13 metalloprotein.
 
   
 0.861
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.806
AGI48237.1
UDP-N-acetylmuramoylalanine-D-glutamate ligase.
     
 0.800
AGI48239.1
Mo-nitrogenase iron protein subunit NifH; Belongs to the NifH/BchL/ChlL family.
     
 0.786
AGI48198.1
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.640
AGI48240.1
Hypothetical protein.
       0.548
AGI48199.1
Uroporphyrinogen-III synthase.
 
  
 0.500
Your Current Organism:
Thermoplasmatales archaeon BRNA1
NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.