STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384175_00862Unannotated protein. (268 aa)    
Predicted Functional Partners:
GCA_000384175_00861
Unannotated protein.
 
 
 0.993
GCA_000384175_05028
Unannotated protein.
  
 
 0.913
GCA_000384175_01917
Unannotated protein.
  
  
 
0.899
GCA_000384175_01477
Unannotated protein.
    
 0.856
GCA_000384175_03627
Unannotated protein.
 
 
 0.836
GCA_000384175_05590
Unannotated protein.
  
 
 0.829
GCA_000384175_05591
Unannotated protein.
 
 
 0.798
GCA_000384175_06307
Unannotated protein.
   
  0.796
GCA_000384175_03797
Unannotated protein.
  
 
 0.794
GCA_000384175_04903
Unannotated protein.
 
 0.790
Your Current Organism:
Streptomyces purpureus
NCBI taxonomy Id: 1054860
Other names: S. purpureus KA281, Streptomyces purpureus ATCC 21405, Streptomyces purpureus JCM 3177, Streptomyces purpureus KA281, Streptomyces purpureus KCTC 9075, Streptomyces purpureus NBRC 13925, Streptomyces purpureus str. KA281, Streptomyces purpureus strain KA281
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.