STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK74677.1Hypothetical protein. (421 aa)    
Predicted Functional Partners:
SHK74660.1
MoxR-like ATPase.
 
     0.907
SHK74715.1
Molybdenum cofactor cytidylyltransferase.
 
     0.893
SHK74760.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
     0.835
SHK74774.1
Carbon-monoxide dehydrogenase medium subunit.
 
     0.830
SHL73266.1
Hypothetical protein.
 
     0.784
SHK97000.1
MoxR-like ATPase.
 
     0.758
SHK89414.1
Carbon-monoxide dehydrogenase large subunit.
 
     0.740
SHK74700.1
Xanthine dehydrogenase accessory factor.
 
     0.716
SHK97017.1
Carbon monoxide dehydrogenase, large subunit apoprotein.
 
     0.524
SHK74737.1
Carbon-monoxide dehydrogenase small subunit.
 
     0.498
Your Current Organism:
Roseovarius marisflavi
NCBI taxonomy Id: 1054996
Other names: CGMCC 1.10799, DSM 24881, JCM 17553, R. marisflavi, Roseovarius marisflavi Li et al. 2014, Roseovarius sp. H50, strain H50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.