STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
CCD39009.1Putative acyl-CoA dehydrogenase oxidoreductase, may be related to NAD-dependent histone acetylation. (462 aa)    
Predicted Functional Partners:
BKIR_c24_4049
Medium-chain-fatty-acid--CoA ligase.
 
 0.998
BKIR_c94_2839
Acetoin dehydrogenase E1 component beta-subunit.
  
 0.947
BKIR_c14_3248
Electron transfer flavoprotein, alpha subunit; Acyl-CoA dehydrogenase.
 0.943
CCD36512.1
Electron transfer flavoprotein, beta subunit.
 
 
 0.925
CCD38109.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.852
BKIR_c2_4628
ABC-type branched-chain amino acid transport systems, periplasmic component; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.833
BKIR_c28_2989
Phenylacetic acid degradation protein PaaN2,ring-opening aldehyde dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.804
CCD39824.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.789
CCD38992.1
NADH ubiquinone oxidoreductase chain A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.
    
  0.774
nuoN
NADH-ubiquinone oxidoreductase chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
    
  0.769
Your Current Organism:
Paraburkholderia kirkii
NCBI taxonomy Id: 1055526
Other names: C. Paraburkholderia kirkii UZHbot1, Candidatus Burkholderia kirkii UZHbot1, Candidatus Paraburkholderia kirkii UZHbot1
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