STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nwat_0068Hypothetical protein. (67 aa)    
Predicted Functional Partners:
Nwat_0069
PFAM: plasmid maintenance system killer; KEGG: noc:Noc_1106 plasmid maintenance system killer.
       0.773
Nwat_0070
Plasmid maintenance system antidote protein, XRE family; TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: gur:Gura_3008 XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein.
       0.737
Nwat_0071
PFAM: YcfA family protein; KEGG: ana:asl2714 hypothetical protein.
       0.498
Nwat_0072
PFAM: protein of unknown function UPF0150; KEGG: noc:Noc_0452 hypothetical protein.
       0.495
Your Current Organism:
Nitrosococcus watsonii
NCBI taxonomy Id: 105559
Other names: N. watsonii C-113, Nitrosococcus sp. C-113, Nitrosococcus watsonii C-113, Nitrosococcus watsonii str. C-113, Nitrosococcus watsonii strain C-113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.