STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nwat_1141PFAM: protein of unknown function DUF938; KEGG: noc:Noc_1253 hypothetical protein. (199 aa)    
Predicted Functional Partners:
Nwat_0908
PFAM: glycosyl transferase family 2; Methyltransferase type 12; glycosyl transferase group 1; KEGG: noc:Noc_2178 glycosyl transferase family protein.
  
  
 0.549
Nwat_1412
PFAM: protein of unknown function DUF482; KEGG: noc:Noc_1715 hypothetical protein.
 
     0.545
Nwat_2718
PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: noc:Noc_0394 hypothetical protein.
     
 0.526
Nwat_2212
PFAM: flagellar protein FlaG protein; KEGG: noc:Noc_2366 flagellar protein FlaG protein.
   
   0.521
Nwat_1142
2-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
       0.448
Nwat_1143
PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: noc:Noc_1255 branched-chain alpha-keto acid dehydrogenase subunit E2.
  
    0.432
Nwat_1626
PFAM: NnrS family protein; KEGG: noc:Noc_1485 NnrS-like protein.
  
     0.408
Your Current Organism:
Nitrosococcus watsonii
NCBI taxonomy Id: 105559
Other names: N. watsonii C-113, Nitrosococcus sp. C-113, Nitrosococcus watsonii C-113, Nitrosococcus watsonii str. C-113, Nitrosococcus watsonii strain C-113
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