STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nwat_1298PFAM: major facilitator superfamily MFS_1; KEGG: noc:Noc_1815 hypothetical protein. (392 aa)    
Predicted Functional Partners:
Nwat_1300
PFAM: IucA/IucC family protein; KEGG: noc:Noc_1812 siderophore synthetase component, IucA/IucC.
  
  
 0.573
Nwat_1301
KEGG: noc:Noc_1811 L-lysine 6-monooxygenase (NADPH).
     
 0.554
Nwat_1299
PFAM: IucA/IucC family protein; Siderophore biosynthesis protein, conserved region; KEGG: noc:Noc_1814 siderophore synthetase component, IucA/IucC.
  
  
 0.553
Nwat_1523
KEGG: noc:Noc_1604 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
      
 0.434
Nwat_1160
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein; KEGG: noc:Noc_1271 hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine ki [...]
      
 0.412
Your Current Organism:
Nitrosococcus watsonii
NCBI taxonomy Id: 105559
Other names: N. watsonii C-113, Nitrosococcus sp. C-113, Nitrosococcus watsonii C-113, Nitrosococcus watsonii str. C-113, Nitrosococcus watsonii strain C-113
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