Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK02095.1 | SHK02121.1 | SAMN05216293_0007 | SAMN05216293_0008 | Predicted metalloprotease, contains C-terminal PDZ domain. | Protein of unknown function. | 0.605 |
SHK02095.1 | SHK02154.1 | SAMN05216293_0007 | SAMN05216293_0009 | Predicted metalloprotease, contains C-terminal PDZ domain. | GSCFA family protein. | 0.605 |
SHK02095.1 | SHK13442.1 | SAMN05216293_0007 | SAMN05216293_0391 | Predicted metalloprotease, contains C-terminal PDZ domain. | Predicted Zn-dependent peptidase. | 0.462 |
SHK02095.1 | SHK33296.1 | SAMN05216293_0007 | SAMN05216293_0812 | Predicted metalloprotease, contains C-terminal PDZ domain. | Zinc carboxypeptidase. | 0.495 |
SHK02095.1 | SHK51120.1 | SAMN05216293_0007 | SAMN05216293_1194 | Predicted metalloprotease, contains C-terminal PDZ domain. | Relaxase/Mobilisation nuclease domain-containing protein. | 0.496 |
SHK02095.1 | SHK71344.1 | SAMN05216293_0007 | SAMN05216293_1723 | Predicted metalloprotease, contains C-terminal PDZ domain. | N-terminal double-transmembrane domain-containing protein. | 0.458 |
SHK02095.1 | SHK71372.1 | SAMN05216293_0007 | SAMN05216293_1724 | Predicted metalloprotease, contains C-terminal PDZ domain. | Hypothetical protein. | 0.456 |
SHK02095.1 | SHK71405.1 | SAMN05216293_0007 | SAMN05216293_1725 | Predicted metalloprotease, contains C-terminal PDZ domain. | Hypothetical protein. | 0.537 |
SHK02095.1 | SHL01579.1 | SAMN05216293_0007 | SAMN05216293_2460 | Predicted metalloprotease, contains C-terminal PDZ domain. | Hypothetical protein. | 0.490 |
SHK02095.1 | SHL51702.1 | SAMN05216293_0007 | SAMN05216293_3634 | Predicted metalloprotease, contains C-terminal PDZ domain. | NHL repeat-containing protein. | 0.466 |
SHK02121.1 | SHK02095.1 | SAMN05216293_0008 | SAMN05216293_0007 | Protein of unknown function. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.605 |
SHK02121.1 | SHK02154.1 | SAMN05216293_0008 | SAMN05216293_0009 | Protein of unknown function. | GSCFA family protein. | 0.802 |
SHK02154.1 | SHK02095.1 | SAMN05216293_0009 | SAMN05216293_0007 | GSCFA family protein. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.605 |
SHK02154.1 | SHK02121.1 | SAMN05216293_0009 | SAMN05216293_0008 | GSCFA family protein. | Protein of unknown function. | 0.802 |
SHK13442.1 | SHK02095.1 | SAMN05216293_0391 | SAMN05216293_0007 | Predicted Zn-dependent peptidase. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.462 |
SHK33296.1 | SHK02095.1 | SAMN05216293_0812 | SAMN05216293_0007 | Zinc carboxypeptidase. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.495 |
SHK51120.1 | SHK02095.1 | SAMN05216293_1194 | SAMN05216293_0007 | Relaxase/Mobilisation nuclease domain-containing protein. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.496 |
SHK51120.1 | SHL01579.1 | SAMN05216293_1194 | SAMN05216293_2460 | Relaxase/Mobilisation nuclease domain-containing protein. | Hypothetical protein. | 0.413 |
SHK51120.1 | SHL51702.1 | SAMN05216293_1194 | SAMN05216293_3634 | Relaxase/Mobilisation nuclease domain-containing protein. | NHL repeat-containing protein. | 0.486 |
SHK71344.1 | SHK02095.1 | SAMN05216293_1723 | SAMN05216293_0007 | N-terminal double-transmembrane domain-containing protein. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.458 |
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