STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK08877.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (383 aa)    
Predicted Functional Partners:
SHK73494.1
PAS domain S-box-containing protein.
 
 
 0.909
SHL35501.1
Hypothetical protein.
  
 0.892
SHK08908.1
Hypothetical protein.
       0.806
SHL36854.1
Response regulator receiver domain-containing protein.
  
 
 
 0.803
SHL31911.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
    
 0.775
SHL33317.1
2-oxoisovalerate dehydrogenase E1 component; Manually curated.
    
 0.775
SHL20652.1
Hypothetical protein.
  
     0.764
SHK30893.1
Ligand-binding sensor domain-containing protein.
   
  0.652
SHK90486.1
PAS domain S-box-containing protein.
 
 
 0.652
SHL68307.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.625
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
Server load: low (22%) [HD]