STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK11163.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
SHK11192.1
Outer membrane receptor proteins, mostly Fe transport.
       0.532
SHK16746.1
Threonine/homoserine/homoserine lactone efflux protein.
  
     0.529
SHL42502.1
Hypothetical protein.
  
     0.526
SHK12375.1
Hypothetical protein.
  
     0.513
SHK60894.1
Protein involved in gliding motility GldC.
  
     0.509
SHK74354.1
Family of unknown function.
  
     0.486
SHK88136.1
Protein of unknown function.
  
     0.476
SHK74457.1
BadF-type ATPase.
  
     0.416
SHK20999.1
Protein of unknown function.
  
     0.409
SHK85990.1
Uncharacterised ACR, YkgG family COG1556.
  
     0.407
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.