STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK18035.1Glycosyltransferase involved in cell wall bisynthesis. (377 aa)    
Predicted Functional Partners:
SHK17856.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.925
SHK18289.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.882
SHK17975.1
O-antigen ligase.
  
 
  0.785
SHK17737.1
UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.774
SHK18005.1
Hypothetical protein.
       0.773
SHK17944.1
N-acetyl sugar amidotransferase.
 
    0.747
SHL03562.1
ATP-dependent DNA helicase RecQ.
    
 
 0.733
SHL41409.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 0.721
SHK58685.1
Carbohydrate-binding module 48 (Isoamylase N-terminal domain).
   
  0.682
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.682
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.