STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK31401.1Iron complex outermembrane recepter protein. (778 aa)    
Predicted Functional Partners:
SHK31278.1
Uncharacterized iron-regulated membrane protein.
 
    0.823
SHK31372.1
Uncharacterized conserved protein, contains GH25 family domain.
 
    0.779
SHK31308.1
Hypothetical protein.
       0.606
SHK31337.1
Hypothetical protein.
       0.594
SHL67693.1
FecR family protein.
  
   0.591
SHK72460.1
FecR family protein.
  
   0.571
SHK69192.1
FecR family protein.
  
   0.560
SHK72814.1
Uncharacterized iron-regulated membrane protein.
 
    0.532
SHK98386.1
FecR family protein.
  
   0.523
SHL15467.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.520
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.