STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK61714.1Threonine/homoserine/homoserine lactone efflux protein. (217 aa)    
Predicted Functional Partners:
SHK61798.1
Hypothetical protein.
 
     0.940
SHK61738.1
Hypothetical protein.
 
     0.909
SHK61768.1
Transport and Golgi organisation 2; Manually curated.
 
    0.853
SHK20069.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
     0.680
SHK53971.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.572
SHK61681.1
YHS domain-containing protein.
       0.568
SHL63749.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
   0.525
SHK43092.1
Fic/DOC family protein.
  
     0.512
SHK68338.1
Repeat domain-containing protein.
  
     0.503
SHK18149.1
VTC domain-containing protein.
  
     0.494
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
Server load: low (18%) [HD]