SHK87339.1 protein (Muricauda antarctica) - STRING interaction network

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Score

SHK87339.1

Putative sigma-54 modulation protein. (100 aa)

Predicted Functional Partners:

rpsU-2

0.933

rpmC

0.909

rpsP

0.888

rpmG

0.883

rplQ

0.882

rpsF

0.879

rpmA

0.878

rplJ

0.877

rpsI

0.875

rpmH

0.874

Your Current Organism:

Muricauda antarctica

NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHK87339.1	rplJ	SAMN05216293_2114	SAMN05216293_2125	Putative sigma-54 modulation protein.	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.877
SHK87339.1	rplQ	SAMN05216293_2114	SAMN05216293_2986	Putative sigma-54 modulation protein.	LSU ribosomal protein L17P; Manually curated.	0.882
SHK87339.1	rpmA	SAMN05216293_2114	SAMN05216293_0253	Putative sigma-54 modulation protein.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.878
SHK87339.1	rpmC	SAMN05216293_2114	SAMN05216293_2967	Putative sigma-54 modulation protein.	LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family.	0.909
SHK87339.1	rpmG	SAMN05216293_2114	SAMN05216293_2167	Putative sigma-54 modulation protein.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.883
SHK87339.1	rpmH	SAMN05216293_2114	SAMN05216293_3759	Putative sigma-54 modulation protein.	LSU ribosomal protein L34P; Manually curated; Belongs to the bacterial ribosomal protein bL34 family.	0.874
SHK87339.1	rpsF	SAMN05216293_2114	SAMN05216293_3812	Putative sigma-54 modulation protein.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.879
SHK87339.1	rpsI	SAMN05216293_2114	SAMN05216293_1329	Putative sigma-54 modulation protein.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.875
SHK87339.1	rpsP	SAMN05216293_2114	SAMN05216293_1237	Putative sigma-54 modulation protein.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.888
SHK87339.1	rpsU-2	SAMN05216293_2114	SAMN05216293_2112	Putative sigma-54 modulation protein.	SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family.	0.933
rplJ	SHK87339.1	SAMN05216293_2125	SAMN05216293_2114	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Putative sigma-54 modulation protein.	0.877
rplJ	rplQ	SAMN05216293_2125	SAMN05216293_2986	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L17P; Manually curated.	0.996
rplJ	rpmA	SAMN05216293_2125	SAMN05216293_0253	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.996
rplJ	rpmC	SAMN05216293_2125	SAMN05216293_2967	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family.	0.999
rplJ	rpmG	SAMN05216293_2125	SAMN05216293_2167	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.996
rplJ	rpmH	SAMN05216293_2125	SAMN05216293_3759	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	LSU ribosomal protein L34P; Manually curated; Belongs to the bacterial ribosomal protein bL34 family.	0.981
rplJ	rpsF	SAMN05216293_2125	SAMN05216293_3812	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.997
rplJ	rpsI	SAMN05216293_2125	SAMN05216293_1329	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.996
rplJ	rpsP	SAMN05216293_2125	SAMN05216293_1237	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.995
rplJ	rpsU-2	SAMN05216293_2125	SAMN05216293_2112	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family.	0.874