STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK99980.1Hypothetical protein; Belongs to the LOG family. (255 aa)    
Predicted Functional Partners:
SHK99924.1
ABC-2 type transport system permease protein.
  
    0.775
SHK99953.1
ABC-2 type transport system permease protein.
  
    0.775
SHL00006.1
Hypothetical protein.
       0.773
SHL00033.1
Uncharacterized conserved protein, DUF2141 family.
       0.773
SHL00057.1
Hypothetical protein.
       0.773
SHL00084.1
ATP cone domain-containing protein.
       0.757
SHK99874.1
ABC-type multidrug transport system, ATPase component.
       0.746
SHK99902.1
ABC-2 type transport system ATP-binding protein.
       0.746
SHL00110.1
Hypothetical protein.
       0.712
SHK99841.1
Hypothetical protein.
       0.613
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.