STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL00377.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (443 aa)    
Predicted Functional Partners:
SHL00414.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  0.955
SHL35501.1
Hypothetical protein.
  
 0.851
SHK90486.1
PAS domain S-box-containing protein.
   
 0.832
SHK54692.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
 
  
 0.817
SHK76254.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  0.813
SHK30893.1
Ligand-binding sensor domain-containing protein.
  
 0.777
SHK09121.1
Two-component system, NtrC family, response regulator HydG.
  
  
 
0.735
SHL09612.1
His Kinase A (phospho-acceptor) domain-containing protein.
  0.719
SHK14974.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  0.701
SHK71019.1
PAS/PAC sensor signal transduction histidine kinase.
  
 0.690
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.