STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL00928.1Transcriptional regulator, BadM/Rrf2 family. (145 aa)    
Predicted Functional Partners:
SHL00950.1
Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
    0.807
SHL00982.1
Hemerythrin HHE cation binding domain-containing protein.
 
    0.730
SHK39391.1
Cysteine desulfurase.
  
 
 0.665
SHL00897.1
Hypothetical protein.
 
    0.632
SHL01009.1
Hypothetical protein.
       0.579
SHK69303.1
Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
    0.564
SHK59438.1
Transcriptional regulator, BadM/Rrf2 family.
  
     0.562
SHL00674.1
Hypothetical protein.
 
     0.496
SHL00766.1
Copper resistance protein D.
       0.433
SHL00736.1
Hypothetical protein.
  
    0.430
Your Current Organism:
Muricauda antarctica
NCBI taxonomy Id: 1055723
Other names: CGMCC 1.12174, JCM 18450, M. antarctica, Muricauda antarctica Wu et al. 2013, Muricauda sp. Ar-22, strain Ar-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.